Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs1244477 | chr10:7869754 | A/C | 1.02E-5 | 485 | 16.07 | 16.25 | 15.5 | KM Plot |
| THCA | rs1244481 | chr10:7891626 | G/C | 7.66E-5 | 486 | 14.93 | 17.03 | 17.77 | KM Plot |
| THCA | rs1244482 | chr10:7891507 | A/C | 7.53E-5 | 490 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244485 | chr10:7889867 | A/G | 8.15E-5 | 488 | 14.93 | 17.03 | 17.22 | KM Plot |
| THCA | rs1244486 | chr10:7888667 | G/T | 3.89E-5 | 488 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244487 | chr10:7888560 | T/C | 3.89E-5 | 488 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244494 | chr10:7882875 | T/C | 3.82E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244496 | chr10:7881062 | A/T | 3.81E-5 | 490 | 14.93 | 16.83 | 17.77 | KM Plot |
| THCA | rs1244497 | chr10:7879982 | A/G | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244498 | chr10:7878532 | C/T | 4.3E-5 | 487 | 14.93 | 17.23 | 17.77 | KM Plot |
| THCA | rs1244499 | chr10:7878369 | C/G | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244500 | chr10:7878319 | C/A | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244501 | chr10:7878310 | A/G | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244502 | chr10:7877784 | G/A | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |
| THCA | rs1244503 | chr10:7877499 | G/C | 3.81E-5 | 489 | 14.93 | 17 | 17.77 | KM Plot |